STRINGSTRING
PBAL39_11135 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_11135" - Cation transport ATPase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_11135Cation transport ATPase (838 aa)    
Predicted Functional Partners:
PBAL39_11140
Copper-resistance protein CopA (918 aa)
 
 
0.882
PBAL39_11130
Uncharacterized protein (164 aa)
 
          0.807
PBAL39_11150
Uncharacterized protein (191 aa)
 
          0.765
PBAL39_11145
Uncharacterized protein (153 aa)
 
          0.762
PBAL39_17989
Cytochrome c oxidase, cbb3-type (703 aa)
         
  0.671
PBAL39_12007
DNA polymerase I (937 aa)
   
   
  0.576
PBAL39_11155
Uncharacterized protein (155 aa)
              0.574
PBAL39_18104
Two-component response regulator (229 aa)
   
 
  0.531
PBAL39_13105
Two-component system response regulator (249 aa)
   
 
  0.531
PBAL39_06141
Two-component response regulator (227 aa)
   
 
  0.531
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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