STRINGSTRING
EDM34551.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM34551.1" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM34551.1Uncharacterized protein; COG0165 Argininosuccinate lyase (155 aa)    
Predicted Functional Partners:
EDM34548.1
Copper-resistance protein CopA; COG2132 Putative multicopper oxidases (918 aa)
 
   
  0.852
EDM34549.1
Uncharacterized protein; COG1858 Cytochrome c peroxidase (153 aa)
 
          0.768
EDM36655.1
Possible component of copper transport system; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (401 aa)
          0.741
EDM34550.1
COG0840 Methyl-accepting chemotaxis protein (191 aa)
 
       
0.737
EDM36650.1
COG2217 Cation transport ATPase (118 aa)
 
            0.734
EDM34547.1
COG2217 Cation transport ATPase (838 aa)
 
        0.640
EDM34546.1
COG3544 Uncharacterized protein conserved in bacteria (164 aa)
 
          0.480
EDM35470.1
Uncharacterized protein; Belongs to the UPF0312 family (185 aa)
   
          0.456
EDM34995.1
annotation not available (90 aa)
   
          0.445
EDM35471.1
annotation not available (454 aa)
   
          0.444
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
Server load: low (7%) [HD]