STRINGSTRING
PBAL39_11185 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_11185" - MgtC/SapB transporter in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_11185MgtC/SapB transporter (156 aa)    
Predicted Functional Partners:
PBAL39_11190
Uncharacterized protein (58 aa)
              0.859
ftsH
ATP-dependent zinc metalloprotease FtsH ; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (697 aa)
       
      0.808
PBAL39_11180
Sulfatase (650 aa)
              0.796
PBAL39_11195
Uncharacterized protein (201 aa)
              0.792
PBAL39_11200
Uncharacterized protein (67 aa)
              0.765
PBAL39_11205
Uncharacterized protein (225 aa)
              0.723
atpB
F-ATPase subunit 6 ; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane (377 aa)
       
      0.687
PBAL39_17824
Two-component system response regulator (225 aa)
       
 
  0.654
PBAL39_17799
Two-component system response regulator (224 aa)
       
 
  0.654
PBAL39_15184
Two-component response regulator (223 aa)
       
 
  0.654
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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