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PBAL39_11245 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_11245" - Cation efflux protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_11245Cation efflux protein (1461 aa)    
Predicted Functional Partners:
PBAL39_11240
Possible membrane-fusion protein (411 aa)
 
   
  0.984
PBAL39_25345
Possible component of copper transport system (401 aa)
 
  0.983
PBAL39_18464
Possible membrane-fusion protein (407 aa)
 
   
  0.902
PBAL39_13090
Putative cation efflux-related lipoprotein (350 aa)
 
   
  0.865
PBAL39_04448
Outer membrane protein (477 aa)
   
 
  0.682
PBAL39_03100
RND efflux system, outer membrane lipoprotein, NodT (477 aa)
   
 
  0.682
PBAL39_13095
Cation efflux system protein czcC (414 aa)
 
          0.652
PBAL39_25340
Possible component of copper transport system (394 aa)
   
          0.645
PBAL39_11225
Heavy metal translocating P-type ATPase (728 aa)
 
   
  0.629
PBAL39_11230
Uncharacterized protein (105 aa)
              0.621
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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