STRINGSTRING
PBAL39_11280 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_11280" - Deoxyribodipyrimidine photolyase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_11280Deoxyribodipyrimidine photolyase (65 aa)    
Predicted Functional Partners:
PBAL39_11285
Uncharacterized protein (117 aa)
              0.815
PBAL39_03859
Cytochrome c551/c552 (134 aa)
   
          0.616
PBAL39_04209
Deoxyribodipyrimidine photolyase (Photoreactivation) (410 aa)
   
          0.558
PBAL39_18414
DNA polymerase III, epsilon subunit (456 aa)
   
          0.485
PBAL39_12107
Putative S-adenosylmethionine-dependent methytransferase (237 aa)
   
          0.457
PBAL39_11275
Uncharacterized protein (140 aa)
              0.453
PBAL39_11270
Uncharacterized protein (197 aa)
              0.406
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (5%) [HD]