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EDM36289.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM36289.1" - COG5651 PPE-repeat proteins in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM36289.1COG5651 PPE-repeat proteins (7799 aa)    
Predicted Functional Partners:
EDM36641.1
COG3210 Large exoproteins involved in heme utilization or adhesion (1729 aa)
   
  0.962
EDM37096.1
COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) (409 aa)
   
 
  0.960
EDM34613.1
COG2911 Uncharacterized protein conserved in bacteria (1473 aa)
     
  0.946
EDM34871.1
COG5651 PPE-repeat proteins (1333 aa)
   
 
  0.942
EDM36996.1
CHU large protein uncharacterized; COG2931 RTX toxins and related Ca2+-binding proteins (3896 aa)
       
  0.936
EDM36632.1
CHU large protein uncharacterized; COG2931 RTX toxins and related Ca2+-binding proteins (576 aa)
   
 
  0.934
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (937 aa)
   
 
  0.933
EDM34014.1
Mannan endo-1,4-beta-mannosidase; COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family (372 aa)
 
   
  0.931
EDM35226.1
COG3209 Rhs family protein (2830 aa)
       
  0.928
EDM38342.1
Uncharacterized protein; COG3866 Pectate lyase (454 aa)
       
  0.925
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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