STRINGSTRING
PBAL39_11377 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_11377" - Penicillin-binding protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_11377Penicillin-binding protein (723 aa)    
Predicted Functional Partners:
PBAL39_07165
Penicillin-binding protein 2 (648 aa)
 
  0.886
PBAL39_22010
Cell division protein, penicillin-binding protein (700 aa)
 
  0.882
PBAL39_01232
Bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase, candidate murein polymerase, glycosyltransferase family protein (820 aa)
 
0.804
PBAL39_09481
Candidate bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase, candidate murein polymerase (741 aa)
 
0.798
PBAL39_11382
Hypoxanthine-guanine phosphoribosyltransferase (179 aa)
              0.797
PBAL39_07170
Rod shape-determining protein (419 aa)
 
  0.786
PBAL39_21990
Cell division protein (388 aa)
 
  0.777
PBAL39_05753
TPR repeat-containing protein (571 aa)
   
          0.709
psd
Phosphatidylserine decarboxylase proenzyme ; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) (219 aa)
              0.643
PBAL39_11372
Iron-sulfur cluster carrier protein ; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP (357 aa)
              0.627
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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