STRINGSTRING
psd protein (Pedobacter sp. BAL39) - STRING interaction network
"psd" - Phosphatidylserine decarboxylase proenzyme in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psdPhosphatidylserine decarboxylase proenzyme ; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) (219 aa)    
Predicted Functional Partners:
PBAL39_20660
CDP-diacylglycerol-serine-O-phosphatidyltransferase (252 aa)
 
 
  0.977
PBAL39_11382
Hypoxanthine-guanine phosphoribosyltransferase (179 aa)
              0.689
cls
Cardiolipin synthase ; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol (485 aa)
     
  0.655
PBAL39_11377
Penicillin-binding protein (723 aa)
              0.643
PBAL39_18344
1-acyl-sn-glycerol-3-phosphate acyltransferase (244 aa)
   
 
  0.562
PBAL39_10021
1-acyl-sn-glycerol-3-phosphate acetyltransferase, putative (244 aa)
   
 
  0.562
PBAL39_20630
Ankyrin (216 aa)
     
    0.560
PBAL39_10291
Ankyrin repeat domain protein (405 aa)
     
    0.560
PBAL39_10286
Ankyrin (450 aa)
     
    0.560
PBAL39_07410
Ankyrin-like protein (164 aa)
     
    0.560
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (9%) [HD]