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EDM36305.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM36305.1" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM36305.1Uncharacterized protein; COG0668 Small-conductance mechanosensitive channel (386 aa)    
Predicted Functional Partners:
rplS
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (115 aa)
              0.546
trmD
annotation not available (31 aa)
              0.531
EDM36344.1
Uncharacterized protein; COG0419 ATPase involved in DNA repair (1110 aa)
   
 
      0.473
EDM35595.1
LemA protein (193 aa)
 
            0.469
EDM34817.1
Probable periplasmic binding protein possible mechanosensitive ion channel component; COG0419 ATPase involved in DNA repair (767 aa)
 
 
 
0.453
EDM38006.1
Mechanosensitive ion channel protein; COG1817 Uncharacterized protein conserved in archaea (780 aa)
 
 
 
0.424
EDM35521.1
Probable periplasmic binding protein possible mechanosensitive ion channel component; COG0840 Methyl-accepting chemotaxis protein (778 aa)
 
 
 
0.411
EDM36308.1
annotation not available (102 aa)
              0.409
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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