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rimM protein (Pedobacter sp. BAL39) - STRING interaction network
"rimM" - Ribosome maturation factor RimM in Pedobacter sp. BAL39
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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rimMRibosome maturation factor RimM ; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes (175 aa)    
Predicted Functional Partners:
PBAL39_11422
tRNA [GM37] methyltransferase ; Specifically methylates guanosine-37 in various tRNAs (225 aa)
              0.851
rpsP
30S ribosomal protein S16 (185 aa)
 
          0.720
PBAL39_08574
Uncharacterized protein (1009 aa)
   
          0.674
PBAL39_19305
Uncharacterized protein (999 aa)
   
          0.671
PBAL39_02207
Uncharacterized protein (237 aa)
 
          0.670
PBAL39_13657
Uncharacterized protein (227 aa)
 
          0.588
PBAL39_06271
Conserved hypothetical lipoprotein (309 aa)
   
          0.588
PBAL39_06276
DNA-directed RNA polymerase subunit omega ; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (108 aa)
   
          0.570
PBAL39_03934
Uncharacterized protein (160 aa)
   
          0.524
PBAL39_00425
Uncharacterized protein (832 aa)
   
          0.511
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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