STRINGSTRING
PBAL39_11467 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_11467" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_11467Uncharacterized protein (214 aa)    
Predicted Functional Partners:
PBAL39_19404
Uncharacterized protein (465 aa)
   
          0.778
PBAL39_04783
Possible ferrodoxin (462 aa)
   
          0.778
PBAL39_01192
Oxidoreductase (242 aa)
   
          0.778
PBAL39_19399
Oxidoreductase, iron-sulphur binding subunit (246 aa)
   
          0.775
ftsH
ATP-dependent zinc metalloprotease FtsH ; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (697 aa)
              0.742
rsfS
Ribosomal silencing factor RsfS ; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation (124 aa)
              0.695
PBAL39_11472
3-oxoacyl-(Acyl carrier protein) synthase (360 aa)
              0.651
PBAL39_11452
Putative biotin--(Acetyl-CoA carboxylase) synthetase (256 aa)
              0.617
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (7%) [HD]