STRINGSTRING
PBAL39_11512 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_11512" - Phosphatidate cytidylyltransferase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_11512Phosphatidate cytidylyltransferase (269 aa)    
Predicted Functional Partners:
PBAL39_20660
CDP-diacylglycerol-serine-O-phosphatidyltransferase (252 aa)
   
 
  0.906
PBAL39_18344
1-acyl-sn-glycerol-3-phosphate acyltransferase (244 aa)
   
 
  0.890
PBAL39_10021
1-acyl-sn-glycerol-3-phosphate acetyltransferase, putative (244 aa)
   
 
  0.881
PBAL39_11517
Metal-dependent membrane protease (330 aa)
              0.880
PBAL39_09006
Diacylglycerol kinase ; Recycling of diacylglycerol produced during the turnover of membrane phospholipid (118 aa)
       
  0.830
frr
Ribosome-releasing factor ; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another (187 aa)
 
   
  0.776
PBAL39_21560
Glutamate dehydrogenase (473 aa)
 
   
  0.738
PBAL39_06551
Isoprenyl transferase ; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids (246 aa)
   
   
  0.736
tsaD
tRNA threonylcarbamoyladenosine biosynthesis protein TsaD ; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction (333 aa)
 
   
  0.696
PBAL39_11522
tRNA-dihydrouridine synthase ; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines (335 aa)
   
        0.683
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (14%) [HD]