STRINGSTRING
apaG protein (Pedobacter sp. BAL39) - STRING interaction network
"apaG" - ApaG in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apaGApaG (128 aa)    
Predicted Functional Partners:
PBAL39_11522
tRNA-dihydrouridine synthase ; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines (335 aa)
   
        0.752
ksgA
S-adenosylmethionine-6-N’, N’-adenosyl(rRNA) dimethyltransferase ; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (260 aa)
   
   
  0.614
PBAL39_25405
Serine O-acetyltransferase (270 aa)
     
 
    0.613
PBAL39_11512
Phosphatidate cytidylyltransferase (269 aa)
   
        0.574
PBAL39_11517
Metal-dependent membrane protease (330 aa)
              0.571
PBAL39_02167
Coproporphyrinogen oxidase (298 aa)
   
   
  0.527
pdxA
4-(phosphohydroxy)-L-threonine dehydrogenase ; Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) (359 aa)
   
   
  0.487
PBAL39_11120
Metallophosphoesterase (245 aa)
   
   
  0.418
PBAL39_11115
Putative phosphoesterase (256 aa)
   
   
  0.418
PBAL39_21345
Co-chaperone Hsc20 (178 aa)
 
        0.414
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (11%) [HD]