STRINGSTRING
PBAL39_11602 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_11602" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_11602Uncharacterized protein (416 aa)    
Predicted Functional Partners:
PBAL39_21915
TonB-dependent receptor domain protein (967 aa)
   
          0.759
PBAL39_11587
Uncharacterized protein (1110 aa)
 
          0.676
PBAL39_04264
Uncharacterized protein (142 aa)
   
          0.666
PBAL39_11607
Peptidase S13, D-Ala-D-Ala carboxypeptidase C (448 aa)
              0.659
PBAL39_02127
Putative two-component system sensor protein histidine kinase (362 aa)
   
          0.648
PBAL39_21785
Uncharacterized protein (195 aa)
   
          0.646
PBAL39_08796
Uncharacterized protein (292 aa)
   
          0.601
PBAL39_02142
Putative TonB-linked outer membrane protein (985 aa)
   
          0.600
PBAL39_11597
Uncharacterized protein (314 aa)
              0.592
PBAL39_06241
Uncharacterized protein (555 aa)
   
          0.585
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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