STRINGSTRING
PBAL39_11627 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_11627" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_11627Uncharacterized protein (134 aa)    
Predicted Functional Partners:
PBAL39_11622
Putative ATPase/GTPase (167 aa)
              0.741
PBAL39_18059
Uncharacterized protein (124 aa)
   
          0.584
PBAL39_11617
Pyridine nucleotide transhydrogenase, alpha subunit (407 aa)
              0.574
PBAL39_11612
D-alanyl-D-alanine dipeptidase ; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide (235 aa)
              0.574
PBAL39_04333
Uncharacterized protein (350 aa)
   
          0.553
PBAL39_25550
Multi-sensor Signal Transduction Histidine Kinase (737 aa)
   
          0.514
PBAL39_14584
Sensor histidine kinase/response regulator (359 aa)
   
          0.497
PBAL39_03864
Putative dehydrogenase (481 aa)
   
          0.451
PBAL39_22882
Putative outer membrane protein (511 aa)
   
          0.442
PBAL39_12845
Uncharacterized protein (509 aa)
   
          0.422
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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