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PBAL39_11687 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_11687" - Exodeoxyribonuclease III in Pedobacter sp. BAL39
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Databases
Textmining
[Homology]
Score
PBAL39_11687Exodeoxyribonuclease III (256 aa)    
Predicted Functional Partners:
nth
DNA-(apurinic or apyrimidinic site) lyase ; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination, leaving a 3’-terminal unsaturated sugar and a product with a terminal 5’-phosphate (220 aa)
 
  0.960
hutI
Imidazolone-5-propionate hydrolase (414 aa)
              0.859
PBAL39_21660
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (374 aa)
     
  0.852
PBAL39_12007
DNA polymerase I (937 aa)
     
  0.843
PBAL39_10556
Putative A/G-specific adenine glycosylase (350 aa)
     
  0.813
PBAL39_16896
ATP-dependent DNA ligase (908 aa)
   
 
  0.786
PBAL39_19849
3-methyladenine DNA glycosylase (222 aa)
   
  0.762
ung
Uracil-DNA glycosylase ; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (225 aa)
     
  0.715
PBAL39_11692
Putative peptidyl-prolyl cis-trans isomerase (236 aa)
 
        0.706
hisB
Histidine biosynthesis bifunctional protein HisB (377 aa)
   
 
  0.666
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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