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EDM36378.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM36378.1" - COG1309 Transcriptional regulator in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM36378.1COG1309 Transcriptional regulator (207 aa)    
Predicted Functional Partners:
EDM36377.1
COG1538 Outer membrane protein (437 aa)
 
          0.911
EDM36375.1
Drug resistance transporter EmrB/QacA subfamily protein; COG0477 Permeases of the major facilitator superfamily (515 aa)
 
          0.867
EDM36376.1
COG1566 Multidrug resistance efflux pump (347 aa)
 
        0.857
EDM36379.1
annotation not available (60 aa)
              0.494
EDM36380.1
COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain (184 aa)
     
      0.475
EDM36374.1
Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle (862 aa)
              0.406
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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