STRINGSTRING
PBAL39_11847 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_11847" - Putative orphan protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_11847Putative orphan protein (575 aa)    
Predicted Functional Partners:
PBAL39_11852
N-acetylmuramoyl-L-alanine amidase (278 aa)
              0.641
PBAL39_12363
Putative acid phosphatase (334 aa)
   
          0.531
PBAL39_07080
Uncharacterized protein (452 aa)
   
          0.474
PBAL39_01167
WD40-like repeat/amidohydrolase domain protein (1080 aa)
   
          0.467
PBAL39_07085
TonB-dependent receptor (952 aa)
   
          0.454
PBAL39_12513
Dipeptidyl aminopeptidase IV, putative (721 aa)
   
          0.452
PBAL39_09021
Uncharacterized protein (469 aa)
   
          0.448
PBAL39_18224
Dipeptidyl aminopeptidase (724 aa)
   
          0.441
PBAL39_09026
TonB-dependent receptor (1092 aa)
   
          0.420
PBAL39_12463
Uncharacterized protein (429 aa)
   
          0.417
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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