STRINGSTRING
PBAL39_11872 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_11872" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_11872Uncharacterized protein (350 aa)    
Predicted Functional Partners:
PBAL39_11867
RteB, two-component system response regulator (466 aa)
              0.861
aspS
Aspartyl-tRNA synthetase (88 aa)
              0.700
PBAL39_11882
Uncharacterized protein (127 aa)
              0.619
PBAL39_11887
Uncharacterized protein (147 aa)
              0.617
PBAL39_11862
Enoyl-CoA hydratase (260 aa)
              0.517
PBAL39_12332
Anthranilate synthase component II (190 aa)
   
      0.505
trpD
Anthranilate phosphoribosyltransferase ; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5’-phosphoribosyl)-anthranilate (PRA) (329 aa)
       
      0.493
PBAL39_25185
Acyl carrier protein ; Carrier of the growing fatty acid chain in fatty acid biosynthesis (82 aa)
   
          0.428
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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