STRINGSTRING
PBAL39_12007 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_12007" - DNA polymerase I in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_12007DNA polymerase I (937 aa)    
Predicted Functional Partners:
PBAL39_21660
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (374 aa)
   
  0.999
PBAL39_10950
DNA polymerase III gamma/tau subunit (382 aa)
 
  0.977
PBAL39_06841
DNA-directed DNA polymerase (1477 aa)
 
  0.974
PBAL39_17654
Ribonucleoside-diphosphate reductase ; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (696 aa)
   
  0.974
PBAL39_08105
Ribonucleoside-diphosphate reductase ; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (792 aa)
   
  0.974
PBAL39_22320
DNA-directed DNA polymerase (1074 aa)
   
  0.970
PBAL39_19594
Ribonuclease HI (157 aa)
 
  0.946
PBAL39_12152
Pyruvate kinase (476 aa)
   
 
  0.945
PBAL39_22315
Nucleotidyltransferase/DNA polymerase involved in DNA repair (500 aa)
   
  0.937
PBAL39_20154
Nucleotidyltransferase/DNA polymerase involved in DNA repair (417 aa)
   
  0.937
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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