STRINGSTRING
PBAL39_12012 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_12012" - UPF0173 metal-dependent hydrolase PBAL39_12012 in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_12012UPF0173 metal-dependent hydrolase PBAL39_12012 (225 aa)    
Predicted Functional Partners:
PBAL39_12017
Uncharacterized protein ; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection (101 aa)
              0.700
PBAL39_19919
3-hexulose-6-phosphate synthase (210 aa)
       
  0.663
PBAL39_12022
Uncharacterized protein (59 aa)
              0.521
PBAL39_10850
Gluconokinase (494 aa)
       
    0.512
PBAL39_07250
Carbohydrate kinase, FGGY (451 aa)
       
    0.512
PBAL39_14894
Uncharacterized protein (715 aa)
     
      0.502
PBAL39_05878
Uncharacterized protein (359 aa)
     
      0.502
PBAL39_02187
Uncharacterized protein (718 aa)
     
      0.502
PBAL39_12247
S1 RNA-binding domain protein (782 aa)
       
      0.483
PBAL39_12027
Uncharacterized protein (111 aa)
              0.440
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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