STRINGSTRING
PBAL39_12047 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_12047" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_12047Uncharacterized protein (232 aa)    
Predicted Functional Partners:
PBAL39_12052
Argininosuccinate synthase (397 aa)
          0.992
argC
N-acetyl-glutamate semialdehyde dehydrogenase (323 aa)
 
          0.966
PBAL39_12062
Acetylornithine delta-aminotransferase (377 aa)
 
          0.938
PBAL39_12067
Ornithine carbamoyltransferase (320 aa)
 
          0.919
argB
NAG kinase (270 aa)
 
          0.918
PBAL39_12082
Acetylornithine deacetylase (355 aa)
 
          0.912
argH
Arginosuccinase (443 aa)
 
          0.898
proC
PCA reductase ; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline (272 aa)
 
          0.635
leuD
Isopropylmalate isomerase ; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (194 aa)
   
          0.548
PBAL39_08055
Uncharacterized protein (109 aa)
   
          0.525
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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