STRINGSTRING
PBAL39_12172 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_12172" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_12172Uncharacterized protein (158 aa)    
Predicted Functional Partners:
PBAL39_22305
Uncharacterized protein (171 aa)
   
          0.714
PBAL39_12167
Possible cell wall protein (128 aa)
 
          0.675
PBAL39_12177
SMC protein-like protein (252 aa)
              0.646
PBAL39_22705
Phytoene dehydrogenase (483 aa)
   
          0.632
PBAL39_04074
Uncharacterized protein (376 aa)
   
          0.586
PBAL39_01527
Zinc finger, CDGSH-type domain protein (74 aa)
   
          0.544
PBAL39_18694
Putative outer membrane protein (505 aa)
   
          0.513
PBAL39_18834
Uncharacterized protein (382 aa)
   
          0.509
PBAL39_08475
Glycosyl hydrolase (908 aa)
   
          0.464
PBAL39_22145
Uncharacterized protein (748 aa)
   
          0.442
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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