STRINGSTRING
PBAL39_12267 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_12267" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_12267Uncharacterized protein (198 aa)    
Predicted Functional Partners:
PBAL39_12262
Uncharacterized protein (152 aa)
          0.993
PBAL39_12252
Uncharacterized protein (353 aa)
 
          0.924
PBAL39_12257
Uncharacterized protein (251 aa)
 
          0.923
PBAL39_12272
Uncharacterized protein (30 aa)
              0.643
ftsH
ATP-dependent zinc metalloprotease FtsH ; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (697 aa)
     
 
  0.581
PBAL39_09681
Cytochrome c oxidase subunit 2 ; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (411 aa)
     
 
  0.516
PBAL39_11185
MgtC/SapB transporter (156 aa)
       
      0.506
PBAL39_09901
MgtC family protein (218 aa)
       
      0.506
PBAL39_03454
Uncharacterized protein (235 aa)
   
          0.501
atpA
F-ATPase subunit alpha ; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit (524 aa)
   
  0.479
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (3%) [HD]