STRINGSTRING
PBAL39_12282 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_12282" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_12282Uncharacterized protein (340 aa)    
Predicted Functional Partners:
PBAL39_12287
RNA-splicing ligase RtcB (466 aa)
 
          0.761
PBAL39_19549
RNA-splicing ligase RtcB (486 aa)
 
          0.748
PBAL39_13377
Uncharacterized protein (2830 aa)
   
          0.719
PBAL39_03339
Uncharacterized protein (116 aa)
   
          0.705
PBAL39_25010
Uncharacterized protein (667 aa)
   
          0.683
PBAL39_01092
Uncharacterized protein (635 aa)
   
          0.671
PBAL39_07965
Uncharacterized protein (347 aa)
   
          0.669
PBAL39_25005
Uncharacterized protein (638 aa)
   
          0.656
PBAL39_10246
Uncharacterized protein (141 aa)
   
          0.626
PBAL39_01097
Uncharacterized protein (659 aa)
   
          0.616
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (5%) [HD]