STRINGSTRING
PBAL39_12363 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_12363" - Putative acid phosphatase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_12363Putative acid phosphatase (334 aa)    
Predicted Functional Partners:
PBAL39_12368
Putative outer membrane protein (508 aa)
              0.845
PBAL39_12373
Putative outer membrane protein (996 aa)
              0.788
PBAL39_12378
Putative anti sigma factor (349 aa)
              0.702
PBAL39_16831
Uncharacterized protein (742 aa)
   
          0.646
PBAL39_16866
Outer membrane protein, putative (1160 aa)
 
          0.591
PBAL39_24715
Putative TonB-dependent outer membrane receptor protein (925 aa)
 
          0.559
PBAL39_22625
Glucose/sorbosone dehydrogenase-like protein (392 aa)
 
          0.558
PBAL39_12383
RNA polymerase ECF-type sigma factor (176 aa)
              0.553
PBAL39_16771
Alkaline phosphatase, putative (468 aa)
   
 
    0.535
PBAL39_07380
Alkaline phosphatase (614 aa)
   
 
    0.535
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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