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PBAL39_12433 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_12433" - Pseudouridine synthase in Pedobacter sp. BAL39
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
PBAL39_12433Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (343 aa)    
Predicted Functional Partners:
PBAL39_02237
Riboflavin biosynthesis protein RibD ; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate (332 aa)
   
  0.872
PBAL39_08821
Pseudouridine synthase (463 aa)
 
  0.864
PBAL39_12443
Uncharacterized protein (103 aa)
              0.859
PBAL39_12438
Aminodeoxychorismate lyase (4-amino-4-deoxychorismate lyase) (176 aa)
              0.859
truB
tRNA-uridine isomerase ; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (258 aa)
 
   
  0.747
coaD
Pantetheine-phosphate adenylyltransferase ; Reversibly transfers an adenylyl group from ATP to 4’- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate (153 aa)
       
    0.728
PBAL39_08140
tRNA-uridine isomerase I ; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (283 aa)
 
   
  0.722
PBAL39_04898
Pseudouridine synthase (329 aa)
 
  0.707
PBAL39_03904
tRNA-uridine isomerase I ; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (267 aa)
 
   
  0.698
ksgA
S-adenosylmethionine-6-N’, N’-adenosyl(rRNA) dimethyltransferase ; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (260 aa)
   
 
  0.641
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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