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PBAL39_12438 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_12438" - Aminodeoxychorismate lyase (4-amino-4-deoxychorismate lyase) in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_12438Aminodeoxychorismate lyase (4-amino-4-deoxychorismate lyase) (176 aa)    
Predicted Functional Partners:
PBAL39_12443
Uncharacterized protein (103 aa)
          0.985
PBAL39_12433
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (343 aa)
              0.859
PBAL39_06226
Uncharacterized protein (271 aa)
   
          0.771
PBAL39_09816
Formiminoglutamase-related protein (393 aa)
   
          0.755
PBAL39_08445
30S ribosomal protein S10 (231 aa)
   
          0.755
PBAL39_13492
Uncharacterized protein (243 aa)
   
          0.748
PBAL39_04798
Uncharacterized protein (194 aa)
   
          0.748
PBAL39_17549
Uncharacterized protein (316 aa)
   
          0.744
PBAL39_25215
Uncharacterized protein (338 aa)
   
          0.722
PBAL39_06206
Probable integral outer membrane protein (566 aa)
   
          0.712
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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