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PBAL39_12473 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_12473" - ABC transporter, permease in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_12473ABC transporter, permease (406 aa)    
Predicted Functional Partners:
PBAL39_24420
Putative lipoprotein releasing system transmembrane protein (410 aa)
   
   
    0.961
lolD
Lipoprotein-releasing system ATP-binding protein LolD ; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner (216 aa)
 
 
  0.949
PBAL39_06546
Outer membrane protein probable bacterial surface antigen (829 aa)
 
        0.850
PBAL39_20750
ABC transporter, ATP-binding protein (232 aa)
   
 
  0.791
PBAL39_01802
Putative ABC transport system ATP-binding protein (221 aa)
   
 
  0.791
PBAL39_12463
Uncharacterized protein (429 aa)
 
          0.760
PBAL39_20730
ABC transporter, ATPase subunit (229 aa)
   
 
  0.758
PBAL39_18334
ABC transporter related protein (252 aa)
   
 
  0.758
PBAL39_13707
ABC transporter related protein (209 aa)
   
 
  0.758
PBAL39_03984
Putative ABC transporter ATP-binding protein (249 aa)
   
 
  0.758
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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