STRINGSTRING
PBAL39_12593 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_12593" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_12593Uncharacterized protein (1842 aa)    
Predicted Functional Partners:
PBAL39_09921
Uncharacterized protein (390 aa)
   
          0.730
PBAL39_09926
Uncharacterized protein (250 aa)
   
          0.716
PBAL39_06206
Probable integral outer membrane protein (566 aa)
   
          0.693
PBAL39_09936
Putative transmembrane protein (324 aa)
   
          0.682
PBAL39_23832
Putative outer membrane protein (643 aa)
   
          0.680
PBAL39_21785
Uncharacterized protein (195 aa)
   
          0.658
PBAL39_17189
Uncharacterized protein (396 aa)
   
          0.658
PBAL39_10810
Putative outer membrane protein (640 aa)
   
          0.654
PBAL39_22105
Putative outer membrane protein (1158 aa)
   
          0.649
PBAL39_10920
Uncharacterized protein (478 aa)
   
          0.647
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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