STRINGSTRING
PBAL39_12668 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_12668" - Transcriptional regulator, AraC family protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_12668Transcriptional regulator, AraC family protein (326 aa)    
Predicted Functional Partners:
PBAL39_25085
Transcriptional regulator, AraC family protein (285 aa)
   
          0.735
PBAL39_19374
Transcriptional regulator (289 aa)
   
          0.691
PBAL39_05123
Transcriptional regulator (307 aa)
   
          0.645
PBAL39_12673
Glyoxalase/bleomycin resistance protein/dioxygenase (141 aa)
              0.601
PBAL39_21300
Transcriptional regulator (340 aa)
   
          0.601
PBAL39_21285
Transcriptional regulator (320 aa)
   
          0.583
PBAL39_23722
Transcriptional regulator (306 aa)
   
          0.563
PBAL39_20404
Transcriptional regulator, AraC family protein (330 aa)
   
          0.546
PBAL39_24900
Lysyl-tRNA synthetase (592 aa)
       
      0.527
PBAL39_21645
Uncharacterized protein (271 aa)
   
          0.492
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (4%) [HD]