STRINGSTRING
PBAL39_12688 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_12688" - OsmC-like protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_12688OsmC-like protein (139 aa)    
Predicted Functional Partners:
PBAL39_02452
HAD-superfamily hydrolase, subfamily IIB (733 aa)
     
   
  0.690
PBAL39_12693
Uncharacterized protein (188 aa)
              0.579
PBAL39_25635
Uncharacterized protein (172 aa)
   
        0.476
PBAL39_19240
Ferritin-like DNA-binding protein (159 aa)
   
   
  0.476
PBAL39_16996
Starvation-inducible DNA-binding protein (157 aa)
   
   
  0.476
PBAL39_12683
Transcriptional regulator, AraC family protein (278 aa)
              0.468
PBAL39_12678
Uncharacterized protein (88 aa)
              0.461
PBAL39_12673
Glyoxalase/bleomycin resistance protein/dioxygenase (141 aa)
 
        0.460
PBAL39_07450
Uncharacterized protein (194 aa)
   
        0.454
PBAL39_05898
Peptide-methionine (S)-S-oxide reductase ; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (326 aa)
     
   
  0.441
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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