STRINGSTRING
PBAL39_12728 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_12728" - Putative TonB dependent receptor outer membrane protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_12728Putative TonB dependent receptor outer membrane protein (1061 aa)    
Predicted Functional Partners:
PBAL39_12723
Putative outer membrane protein (642 aa)
 
          0.970
PBAL39_12718
Uncharacterized protein (233 aa)
              0.780
PBAL39_13939
Putative outer membrane protein (565 aa)
 
          0.778
PBAL39_12703
Putative beta-xylosidase (367 aa)
 
          0.778
PBAL39_19999
Putative outer membrane protein (601 aa)
   
          0.763
PBAL39_18869
Putative outer membrane protein (589 aa)
   
          0.760
PBAL39_12708
Glutaminase (812 aa)
 
          0.757
PBAL39_23832
Putative outer membrane protein (643 aa)
   
          0.754
PBAL39_04413
Putative outer membrane protein (596 aa)
   
          0.748
PBAL39_10810
Putative outer membrane protein (640 aa)
   
          0.747
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (3%) [HD]