STRINGSTRING
PBAL39_12820 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_12820" - Sensor histidine kinase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_12820Sensor histidine kinase (528 aa)    
Predicted Functional Partners:
PBAL39_12825
Probable capsular synthesis response regulator transcription regulator protein (221 aa)
 
          0.966
PBAL39_24183
Putative outer membrane protein (524 aa)
   
          0.646
PBAL39_05823
Selenocysteine lyase (359 aa)
   
          0.635
PBAL39_00085
Outer membrane receptor ragA protein (602 aa)
   
          0.605
PBAL39_23687
Uncharacterized protein (301 aa)
   
          0.584
PBAL39_04548
TraM-like protein (308 aa)
   
          0.584
PBAL39_18159
Heme oxygenase (187 aa)
   
          0.581
PBAL39_14084
Uncharacterized protein (316 aa)
   
          0.556
PBAL39_02820
Putative HlyD-family transporter (435 aa)
   
          0.554
PBAL39_07680
Uncharacterized protein (117 aa)
   
          0.553
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (2%) [HD]