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PBAL39_12825 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_12825" - Probable capsular synthesis response regulator transcription regulator protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_12825Probable capsular synthesis response regulator transcription regulator protein (221 aa)    
Predicted Functional Partners:
PBAL39_12820
Sensor histidine kinase (528 aa)
 
          0.966
PBAL39_07680
Uncharacterized protein (117 aa)
   
          0.681
PBAL39_05823
Selenocysteine lyase (359 aa)
   
          0.676
PBAL39_00085
Outer membrane receptor ragA protein (602 aa)
   
          0.665
PBAL39_20299
Uncharacterized protein (471 aa)
   
          0.655
PBAL39_25515
Uncharacterized protein (767 aa)
   
          0.650
PBAL39_13025
Uncharacterized protein (261 aa)
   
          0.642
PBAL39_20274
Uncharacterized protein (462 aa)
   
          0.625
PBAL39_22897
Uncharacterized protein (462 aa)
   
          0.623
PBAL39_11150
Uncharacterized protein (191 aa)
   
          0.623
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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