STRINGSTRING
PBAL39_12830 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_12830" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_12830Uncharacterized protein (353 aa)    
Predicted Functional Partners:
PBAL39_12845
Uncharacterized protein (509 aa)
 
          0.596
PBAL39_12840
Uncharacterized protein (127 aa)
              0.554
PBAL39_12835
Uncharacterized protein (449 aa)
              0.554
PBAL39_12850
Uncharacterized protein (1211 aa)
              0.543
recG
ATP-dependent DNA helicase RecG ; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3’- to 5’- polarity. Unwinds branched duplex DNA (Y-DNA) (701 aa)
       
      0.527
PBAL39_25100
Sodium--dicarboxylate symporter (477 aa)
       
      0.483
PBAL39_14769
C4-dicarboxylate transport protein (411 aa)
       
      0.483
PBAL39_12825
Probable capsular synthesis response regulator transcription regulator protein (221 aa)
              0.484
PBAL39_12820
Sensor histidine kinase (528 aa)
              0.465
PBAL39_12855
Uncharacterized protein (260 aa)
              0.450
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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