STRINGSTRING
PBAL39_12980 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_12980" - Peptidase S41 in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_12980Peptidase S41 (741 aa)    
Predicted Functional Partners:
PBAL39_12985
Thiol-disulfide interchange protein (394 aa)
              0.681
PBAL39_15234
Glyoxalase family protein (117 aa)
   
          0.655
PBAL39_13025
Uncharacterized protein (261 aa)
   
          0.594
PBAL39_14829
Uncharacterized protein (359 aa)
   
          0.531
PBAL39_12975
Uncharacterized protein (270 aa)
              0.527
PBAL39_12593
Uncharacterized protein (1842 aa)
   
          0.525
PBAL39_12970
Isocitrate lyase (423 aa)
              0.514
PBAL39_00922
Uncharacterized protein (159 aa)
   
          0.511
PBAL39_07675
Uncharacterized protein (612 aa)
   
          0.508
PBAL39_01527
Zinc finger, CDGSH-type domain protein (74 aa)
   
          0.470
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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