STRINGSTRING
PBAL39_13160 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_13160" - Putative anti sigma factor in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_13160Putative anti sigma factor (355 aa)    
Predicted Functional Partners:
PBAL39_18704
Putative anti-sigma factor (321 aa)
   
          0.778
PBAL39_24350
Putative anti-sigma factor (397 aa)
   
          0.777
PBAL39_16621
Putative anti-sigma factor (376 aa)
   
          0.777
PBAL39_13949
Putative anti-sigma factor (344 aa)
   
          0.777
PBAL39_07695
Putative anti-sigma factor (392 aa)
   
          0.777
PBAL39_07230
Putative anti-sigma factor (325 aa)
   
          0.777
PBAL39_03484
Putative anti-sigma factor (336 aa)
   
          0.777
PBAL39_00707
Putative anti-sigma factor (388 aa)
   
          0.777
PBAL39_00265
Putative anti-sigma factor (380 aa)
   
          0.777
PBAL39_22590
Putative anti-sigma factor (401 aa)
   
          0.776
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (6%) [HD]