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STRINGSTRING
EDM35431.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM35431.1" - annotation not available in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM35431.1annotation not available (117 aa)    
Predicted Functional Partners:
EDM36206.1
Protein-glutamate methylesterase; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain (1616 aa)
   
  0.968
EDM36391.1
Histidine kinase; COG0642 Signal transduction histidine kinase (1198 aa)
   
  0.956
EDM33940.1
Sensor histidine kinase/response regulator fusion protein; COG0642 Signal transduction histidine kinase (1160 aa)
   
  0.956
EDM35181.1
PAS; COG2203 FOG- GAF domain (814 aa)
     
  0.933
EDM38595.1
Two-component system sensor histidine kinase/response regulator, hybrid (’one component system’); COG1879 ABC-type sugar transport system, periplasmic component (918 aa)
   
  0.933
EDM38004.1
Sensor histidine kinase with PAS signal sensor domains; COG2202 FOG- PAS/PAC domain (813 aa)
     
  0.924
EDM37112.1
Multi-sensor hybrid histidine kinase; COG2203 FOG- GAF domain (903 aa)
     
  0.883
EDM35499.1
COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase) (335 aa)
   
 
  0.864
EDM36510.1
Two-component sensor histidine kinase; COG2202 FOG- PAS/PAC domain (1147 aa)
     
  0.859
EDM35432.1
Two-component system response regulator protein; COG3279 Response regulator of the LytR/AlgR family (232 aa)
              0.845
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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