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PBAL39_13235 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_13235" - Transcriptional regulator, TetR family protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_13235Transcriptional regulator, TetR family protein (201 aa)    
Predicted Functional Partners:
PBAL39_13240
Uncharacterized protein (143 aa)
              0.632
PBAL39_16399
Transcriptional regulator, MarR family protein (161 aa)
   
          0.512
PBAL39_19859
FMN oxidoreductase (368 aa)
   
          0.501
PBAL39_13230
Alkylated DNA repair protein (197 aa)
              0.486
PBAL39_13245
Uncharacterized protein (213 aa)
              0.481
PBAL39_13250
Uncharacterized protein (813 aa)
 
          0.467
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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