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EDM35451.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM35451.1" - Putative outer membrane protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM35451.1Putative outer membrane protein; Probably involved in nutrient binding (512 aa)    
Predicted Functional Partners:
EDM35450.1
Probably involved in nutrient binding; COG1629 Outer membrane receptor proteins, mostly Fe transport (1009 aa)
 
          0.938
EDM37772.1
Probable oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating) (517 aa)
     
  0.820
EDM37208.1
Probably involved in nutrient binding; COG4771 Outer membrane receptor for ferrienterochelin and colicins (1012 aa)
   
          0.749
EDM38075.1
Probably involved in nutrient binding; COG1629 Outer membrane receptor proteins, mostly Fe transport (1053 aa)
   
          0.735
EDM38554.1
COG0155 Sulfite reductase, beta subunit (hemoprotein) (698 aa)
     
  0.717
EDM37763.1
Probably involved in nutrient binding; COG4206 Outer membrane cobalamin receptor protein (1105 aa)
   
          0.715
EDM34645.1
annotation not available (992 aa)
 
          0.706
EDM35156.1
Probably involved in nutrient binding; COG1629 Outer membrane receptor proteins, mostly Fe transport (1030 aa)
   
          0.701
EDM35449.1
Uncharacterized protein; COG3292 Predicted periplasmic ligand-binding sensor domain (969 aa)
 
          0.700
EDM34338.1
Uncharacterized protein; COG4206 Outer membrane cobalamin receptor protein (993 aa)
   
          0.700
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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