STRINGSTRING
PBAL39_13320 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_13320" - Glycosyl hydrolase in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_13320Glycosyl hydrolase (494 aa)    
Predicted Functional Partners:
PBAL39_00627
Beta-galactosidase (959 aa)
   
 
    0.860
PBAL39_13325
Glycoside hydrolase, family 5 (197 aa)
 
          0.860
PBAL39_24203
Beta-galactosidase (821 aa)
 
 
    0.854
PBAL39_00240
Lactase (1196 aa)
     
 
    0.825
PBAL39_08000
Glucosylceramidase (480 aa)
 
   
 
0.724
PBAL39_13315
Putative outer membrane protein (512 aa)
 
          0.643
PBAL39_24213
Arabinogalactan endo-beta-1,4-galactanase (348 aa)
   
   
    0.635
PBAL39_13305
Uncharacterized protein (969 aa)
 
          0.613
PBAL39_23087
Beta-mannosidase (1016 aa)
   
 
    0.602
PBAL39_13337
Helix-turn-helix, AraC type (203 aa)
 
          0.598
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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