STRINGSTRING
PBAL39_13397 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_13397" - Phage related tail fiber protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_13397Phage related tail fiber protein (827 aa)    
Predicted Functional Partners:
PBAL39_13402
Uncharacterized protein (1204 aa)
           
0.671
PBAL39_13392
Uncharacterized protein (148 aa)
              0.627
PBAL39_13417
Uncharacterized protein (1217 aa)
           
0.622
PBAL39_13412
Uncharacterized protein (187 aa)
              0.622
PBAL39_13407
Uncharacterized protein (372 aa)
           
0.622
PBAL39_13387
Uncharacterized protein (140 aa)
              0.621
PBAL39_19325
RNA polymerase, sigma-E factor heat shock and oxidative stress (152 aa)
   
          0.527
PBAL39_06626
Uncharacterized protein (149 aa)
   
          0.517
PBAL39_13382
Uncharacterized protein (135 aa)
              0.516
PBAL39_13377
Uncharacterized protein (2830 aa)
              0.516
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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