STRINGSTRING
PBAL39_13437 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_13437" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_13437Uncharacterized protein (107 aa)    
Predicted Functional Partners:
argS
Arginyl-tRNA synthetase (591 aa)
   
          0.759
PBAL39_13442
ABC transporter, ATP-binding protein (596 aa)
              0.722
murA
UDP-N-acetylglucosamine enolpyruvyl transferase ; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine (441 aa)
   
          0.688
PBAL39_17424
Arginine decarboxylase (463 aa)
   
          0.624
PBAL39_06201
Uncharacterized protein (1005 aa)
   
          0.620
PBAL39_06221
Possible biopolymer transport protein (133 aa)
   
          0.599
PBAL39_21930
Uncharacterized protein (327 aa)
   
          0.580
PBAL39_22010
Cell division protein, penicillin-binding protein (700 aa)
   
          0.574
PBAL39_10221
Uncharacterized protein (117 aa)
   
          0.572
PBAL39_13657
Uncharacterized protein (227 aa)
   
          0.569
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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