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PBAL39_13442 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_13442" - ABC transporter, ATP-binding protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_13442ABC transporter, ATP-binding protein (596 aa)    
Predicted Functional Partners:
PBAL39_01667
Sugar phosphate isomerase, KpsF/GutQ family protein (321 aa)
   
  0.861
PBAL39_11662
ABC transporter, ATP-binding protein (205 aa)
   
  0.783
PBAL39_13437
Uncharacterized protein (107 aa)
              0.722
lpxC
UDP-3-O-[R-3-hydroxymyristoyl]-N-acetylglucosamine deacetylase ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis (469 aa)
   
 
  0.698
PBAL39_13447
Leucine dehydrogenase (362 aa)
   
        0.696
PBAL39_01802
Putative ABC transport system ATP-binding protein (221 aa)
0.683
PBAL39_20750
ABC transporter, ATP-binding protein (232 aa)
0.682
lolD
Lipoprotein-releasing system ATP-binding protein LolD ; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner (216 aa)
0.678
PBAL39_14869
Probable bacteriocin/lantibiotic ABC transporter, ATP-binding protein (743 aa)
 
 
0.663
PBAL39_13452
N utilization substance protein B homolog ; Involved in the transcription termination process (297 aa)
 
          0.657
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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