STRINGSTRING
PBAL39_13487 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_13487" - Transcriptional regulator in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_13487Transcriptional regulator (149 aa)    
Predicted Functional Partners:
PBAL39_13467
Uncharacterized protein (315 aa)
 
          0.854
coaE
Dephosphocoenzyme A kinase ; Catalyzes the phosphorylation of the 3’-hydroxyl group of dephosphocoenzyme A to form coenzyme A (199 aa)
              0.833
PBAL39_13482
Uncharacterized protein (53 aa)
              0.831
PBAL39_13477
Uncharacterized protein (313 aa)
              0.830
PBAL39_08220
Uncharacterized protein (420 aa)
   
          0.748
PBAL39_05658
Uncharacterized protein (218 aa)
   
          0.742
PBAL39_01632
Tetratricopeptide repeat domain protein (111 aa)
   
          0.717
PBAL39_08070
Uncharacterized protein (694 aa)
   
          0.710
PBAL39_11587
Uncharacterized protein (1110 aa)
   
          0.660
PBAL39_21395
Uncharacterized protein (681 aa)
   
          0.655
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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