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PBAL39_13612 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_13612" - Predicted permease in Pedobacter sp. BAL39
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_13612Predicted permease (300 aa)    
Predicted Functional Partners:
tgt
tRNA-guanine transglycosylase ; Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermodified nucleoside queuosine (Q) (7-(((4,5-cis- dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) (376 aa)
   
        0.906
PBAL39_13617
Uncharacterized protein (367 aa)
              0.904
PBAL39_13627
Putative transmembrane glycosyltransferase (360 aa)
              0.617
gidB
16S rRNA 7-methylguanosine methyltransferase ; Specifically methylates the N7 position of a guanine in 16S rRNA (210 aa)
              0.604
secY
Protein translocase subunit SecY ; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently (444 aa)
     
      0.538
PBAL39_19569
Putative ABC-transporter membrane-spanning ATP-binding component (580 aa)
     
      0.530
PBAL39_13442
ABC transporter, ATP-binding protein (596 aa)
     
      0.530
PBAL39_10456
ABC transporter, ATP-binding protein/permease (609 aa)
     
      0.530
PBAL39_08135
ABC transporter, ATP-binding/membrane-spanning protein (590 aa)
     
      0.530
PBAL39_02825
Putative hemolysin secretion transport system ATP-binding protein (733 aa)
     
      0.530
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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