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PBAL39_13642 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_13642" - Putative DNA processing Smf-like protein in Pedobacter sp. BAL39
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
PBAL39_13642Putative DNA processing Smf-like protein (365 aa)    
Predicted Functional Partners:
PBAL39_10990
Magnesium chelatase, subunit ChlI (393 aa)
 
  0.885
PBAL39_11255
Magnesium chelatase, subunit ChlI (143 aa)
 
 
  0.868
PBAL39_04908
Putative amidophosphoribosyl-transferase (232 aa)
 
 
  0.783
PBAL39_06896
Uncharacterized protein (188 aa)
 
   
  0.768
topA
DNA topoisomerase I ; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (855 aa)
            0.682
PBAL39_18204
Competence protein (588 aa)
 
   
  0.654
PBAL39_13637
Uncharacterized protein (65 aa)
              0.647
PBAL39_09761
UPF0102 protein PBAL39_09761 (120 aa)
 
        0.611
PBAL39_13647
Cystathionine beta-synthase (453 aa)
              0.529
fmt
Methionyl-tRNA formyltransferase ; Modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by- (I) promoting its recognition by IF2 and (II) impairing its binding to EFTu-GTP (297 aa)
 
     
  0.528
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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