STRINGSTRING
PBAL39_13742 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_13742" - Nitroreductase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_13742Nitroreductase (192 aa)    
Predicted Functional Partners:
PBAL39_13747
Uncharacterized protein (155 aa)
              0.862
PBAL39_13737
Uncharacterized protein (208 aa)
              0.689
PBAL39_19859
FMN oxidoreductase (368 aa)
       
  0.626
PBAL39_15939
Putative NADH oxidase (377 aa)
       
  0.626
PBAL39_15824
NADH-flavin oxidoreductase/NADH oxidase (374 aa)
       
  0.626
PBAL39_12037
NADH-flavin oxidoreductase/NADH oxidase (358 aa)
       
  0.626
PBAL39_00210
NADH-flavin oxidoreductase/NADH oxidase (331 aa)
       
  0.626
PBAL39_13732
Uncharacterized protein (281 aa)
              0.599
PBAL39_24705
Uncharacterized protein (335 aa)
   
 
  0.559
PBAL39_19065
Luciferase family protein (329 aa)
   
 
  0.559
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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