STRINGSTRING
PBAL39_13837 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_13837" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_13837Uncharacterized protein (202 aa)    
Predicted Functional Partners:
PBAL39_07850
Uncharacterized protein (159 aa)
   
          0.673
PBAL39_21930
Uncharacterized protein (327 aa)
   
          0.643
pyrD
Dihydroorotate oxidase ; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor (342 aa)
   
   
    0.614
PBAL39_13832
Uncharacterized protein (811 aa)
              0.611
PBAL39_21475
Uncharacterized protein (342 aa)
   
          0.571
PBAL39_13827
Orotate phosphoribosyltransferase ; Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) (219 aa)
              0.485
PBAL39_21665
Possible gliding motility protein, possible ABC-related protein (559 aa)
   
          0.480
PBAL39_04798
Uncharacterized protein (194 aa)
   
          0.468
PBAL39_06006
Uncharacterized protein (89 aa)
   
          0.417
PBAL39_24068
Uncharacterized protein (1473 aa)
   
          0.413
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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